harpy.datasets.xenium_human_lung_cancer

harpy.datasets.xenium_human_lung_cancer(output=None, path=None)

Example transcriptomics dataset

Data downloaded from 10x Genomics (accessed 01/10/2024): https://www.10xgenomics.com/datasets/preview-data-ffpe-human-lung-cancer-with-xenium-multimodal-cell-segmentation-1-standard

Parameters:

• output (str | Path | None (default: None)) – The path where the resulting SpatialData object will be backed. If None, it will not be backed to a zarr store. We recommend specifying output.

• path (str | Path | None (default: None)) – If None, the example data will be downloaded into the default cache directory for your OS. Provide a custom path to change this behavior.

Return type:

SpatialData

Returns:

: A SpatialData object.